Ligase-Independent Cloning of Amylase Gene from a Local Bacillus subtilis Isolate and Biochemical Characterization of the Purified Enzyme

dc.contributor.authorOzturk, Merve Tuzlakoglu
dc.contributor.authorAkbulut, Nagihan
dc.contributor.authorOzturk, Saliha Issever
dc.contributor.authorGumusel, Fusun
dc.date.accessioned2025-10-29T11:30:56Z
dc.date.issued2013
dc.departmentGebze Teknik Üniversitesi
dc.description.abstractFive hundred ninety-seven bacterial isolates from Turkish hot spring water sources were screened for their ability to produce extracellular alpha-amylase. Among them, a high enzyme-producing Bacillus subtilis isolate, A28, was selected, and its alpha-amylase gene was cloned and expressed in Escherichia coli by a ligase-independent method. alpha-Amylase from the recombinant strain was purified to homogeneity by Q-Sepharose anion exchange and Sephacryl S-100 gel filtration chromatographies. The final yield of the enzyme was about 22.5 % of the initial activity, with a 16.4-fold increase in specific activity compared with the culture lysate. The optimum temperature and pH of the enzyme were 70 A degrees C and 6.0, respectively. The enzyme was highly active at acidic-neutral pH range of 4.5-7.0. The amy28 alpha-amylase retained 100 % of its activity after incubation at 50 A degrees C for 90 min. Co+2, Cu2+, Fe2+, Fe3+, Ni+2, and Zn+2 caused significant inhibition in enzyme activity, which was not affected by Na+, Mg2+, Li+, and Ba2+. The activity was inhibited about 70 % upon treatment of the enzyme with 10 mM ethylenediaminetetraacetic acid. However, Ca2+ ions known as high temperature stabilizer for other amylases did not stimulate the activity of the enzyme. Due to pH stability and thermostability of the recombinant amylase, this enzyme may be suitable in starch processing, brewing, and food industries.
dc.description.sponsorshipGebze Institute of Technology Kocaeli, Turkey [07-A10]
dc.description.sponsorshipThis work was partially funded by Gebze Institute of Technology Kocaeli, Turkey [Project number 07-A10]. The authors would like to thank Dr. Alp Kibaroglu for his help on DNA sequencing studies. We are grateful to Dr. Aziz Tanriseven for material providing. We thank Dr. Tamer Yagci for general help and useful conversations.
dc.identifier.doi10.1007/s12010-013-0331-y
dc.identifier.endpage278
dc.identifier.issn0273-2289
dc.identifier.issn1559-0291
dc.identifier.issue2
dc.identifier.pmid23832859
dc.identifier.scopus2-s2.0-84883749506
dc.identifier.scopusqualityQ2
dc.identifier.startpage263
dc.identifier.urihttps://doi.org/10.1007/s12010-013-0331-y
dc.identifier.urihttps://hdl.handle.net/20.500.14854/11811
dc.identifier.volume171
dc.identifier.wosWOS:000324110500001
dc.identifier.wosqualityQ3
dc.indekslendigikaynakWeb of Science
dc.indekslendigikaynakScopus
dc.indekslendigikaynakPubMed
dc.language.isoen
dc.publisherSpringer
dc.relation.ispartofApplied Biochemistry and Biotechnology
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.snmzKA_WOS_20251020
dc.subjectalpha-Amylase
dc.subjectBacillus
dc.subjectLigation-independent cloning
dc.subjectPurification
dc.subjectBiochemical characterization
dc.titleLigase-Independent Cloning of Amylase Gene from a Local Bacillus subtilis Isolate and Biochemical Characterization of the Purified Enzyme
dc.typeArticle

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