Conserved Amino Acid Residues that Affect Structural Stability ofCandida boidiniiFormate Dehydrogenase

dc.contributor.authorBulut, Huri
dc.contributor.authorYuksel, Busra
dc.contributor.authorGul, Mehmet
dc.contributor.authorEren, Meryem
dc.contributor.authorKaratas, Ersin
dc.contributor.authorKara, Nazli
dc.contributor.authorYilmazer, Berin
dc.date.accessioned2025-10-29T11:30:56Z
dc.date.issued2021
dc.departmentFakülteler, Mühendislik Fakültesi, Biyomühendislik Bölümü
dc.description.abstractThe NAD(+)-dependent formate dehydrogenase (FDH; EC 1.2.1.2) fromCandida boidinii(CboFDH) has been extensively used in NAD(H)-dependent industrial biocatalysis as well as in the production of renewable fuels and chemicals from carbon dioxide. In the present work, the effect of amino acid residues Phe285, Gln287, and His311 on structural stability was investigated by site-directed mutagenesis. The wild-type and mutant enzymes (Gln287Glu, His311Gln, and Phe285Thr/His311Gln) were cloned and expressed inEscherichia coli.Circular dichroism (CD) spectroscopy was used to determine the effect of each mutation on thermostability. The results showed the decisive roles of Phe285, Gln287, and His311 on enhancing the enzyme's thermostability. The melting temperatures for the wild-type and the mutant enzymes Gln287Glu, His311Gln, and Phe285Thr/His311Gln were 64, 70, 77, and 73 degrees C, respectively. The effects of pH and temperature on catalytic activity of the wild-type and mutant enzymes were also investigated. Interestingly, the mutant enzyme His311Gln exhibits a large shift of pH optimum at the basic pH range (1 pH unit) and substantial increase of the optimum temperature (25 degrees C). The present work supports the multifunctional role of the conserved residues Phe285, Gln287, and His311 and further underlines their pivotal roles as targets in protein engineering studies.
dc.description.sponsorshipScientific Research Projects Unit of Bezmialem Vakif University
dc.description.sponsorshipThis study was financially supported by the Scientific Research Projects Unit of Bezmialem Vakif University.
dc.identifier.doi10.1007/s12010-020-03429-0
dc.identifier.endpage376
dc.identifier.issn0273-2289
dc.identifier.issn1559-0291
dc.identifier.issue2
dc.identifier.orcid0000-0001-5513-1866
dc.identifier.orcid0000-0001-6848-7618
dc.identifier.orcid0000-0002-6765-2543
dc.identifier.orcid0000-0003-4396-7142
dc.identifier.orcid0000-0001-5018-1450
dc.identifier.orcid0000-0002-6190-6549
dc.identifier.pmid32974869
dc.identifier.scopus2-s2.0-85091498245
dc.identifier.scopusqualityQ2
dc.identifier.startpage363
dc.identifier.urihttps://doi.org/10.1007/s12010-020-03429-0
dc.identifier.urihttps://hdl.handle.net/20.500.14854/11805
dc.identifier.volume193
dc.identifier.wosWOS:000572586600001
dc.identifier.wosqualityQ3
dc.indekslendigikaynakWeb of Science
dc.indekslendigikaynakScopus
dc.indekslendigikaynakPubMed
dc.language.isoen
dc.publisherSpringer
dc.relation.ispartofApplied Biochemistry and Biotechnology
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.snmzKA_WOS_20251020
dc.subjectCandida boidinii
dc.subjectFormate dehydrogenase
dc.subjectSite-directed mutagenesis
dc.subjectThermostability
dc.subjectMolecular modeling
dc.titleConserved Amino Acid Residues that Affect Structural Stability ofCandida boidiniiFormate Dehydrogenase
dc.typeArticle

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