The Development of Machine Learning-Assisted Software for Predicting the Interaction Behaviours of Lactic Acid Bacteria and Listeria monocytogenes

dc.contributor.authorTarlak, Fatih
dc.contributor.authorCosta, Jean Carlos Correia Peres
dc.contributor.authorYucel, Ozgun
dc.date.accessioned2025-10-29T11:08:54Z
dc.date.issued2025
dc.departmentFakülteler, Temel Bilimler Fakültesi, Kimya Bölümü
dc.departmentFakülteler, Mühendislik Fakültesi, Biyomühendislik Bölümü
dc.description.abstractBiopreservation technology has emerged as a promising approach to enhance food safety and extend shelf life by leveraging the antimicrobial properties of beneficial microorganisms. This study aims to develop precise predictive models to characterize the growth and interaction dynamics of lactic acid bacteria (LAB) and Listeria monocytogenes, which serve as bioprotective agents in food systems. Using both traditional and machine learning modelling approaches, we analyzed data from previously published growth curves in broth (BHI) and milk under isothermal conditions (4, 10, and 30 degrees C). The models evaluated mono-culture conditions for L. monocytogenes and LAB, as well as their competitive interactions in co-culture scenarios. The modified Gompertz model demonstrated the best performance for mono-culture simulations, while a combination of the modified Gompertz and Lotka-Volterra models effectively described co-culture interactions, achieving high adjusted R-squared values (adjusted R2 = 0.978 and 0.962) and low root mean square errors (RMSE = 0.324 and 0.507) for BHI and milk, respectively. Machine learning approaches further validated these findings, with improved statistical indices (adjusted R2 = 0.988 and 0.966, RMSE = 0.242 and 0.475 for BHI and milk, respectively), suggesting their potential as robust alternatives to traditional methods. The integration of machine learning-assisted software developed in this work into predictive microbiology demonstrates significant advancements by bypassing the conventional primary and secondary modelling steps, enabling a streamlined, precise characterization of microbial interactions in food products.
dc.identifier.doi10.3390/life15020244
dc.identifier.issn2075-1729
dc.identifier.issue2
dc.identifier.orcid0000-0001-8916-2628
dc.identifier.orcid0000-0001-6839-8746
dc.identifier.orcid0000-0001-5351-1865
dc.identifier.pmid40003653
dc.identifier.scopus2-s2.0-85218991880
dc.identifier.scopusqualityQ1
dc.identifier.urihttps://doi.org/10.3390/life15020244
dc.identifier.urihttps://hdl.handle.net/20.500.14854/5554
dc.identifier.volume15
dc.identifier.wosWOS:001431570500001
dc.identifier.wosqualityQ1
dc.indekslendigikaynakWeb of Science
dc.indekslendigikaynakScopus
dc.indekslendigikaynakPubMed
dc.language.isoen
dc.publisherMdpi
dc.relation.ispartofLife-Basel
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı
dc.rightsinfo:eu-repo/semantics/openAccess
dc.snmzKA_WOS_20251020
dc.subjectbiopreservation
dc.subjectinteraction model
dc.subjectmachine learning
dc.subjectlactic acid bacteria
dc.subjectListeria monocytogenes
dc.titleThe Development of Machine Learning-Assisted Software for Predicting the Interaction Behaviours of Lactic Acid Bacteria and Listeria monocytogenes
dc.typeArticle

Dosyalar