Biochemical characterization and detection of antitumor activity of L-asparaginase from thermophilic Geobacillus kaustophilus DSM 7263T

dc.contributor.authorOzdemir, F. Inci
dc.contributor.authorOrhan, Muge Didem
dc.contributor.authorAtasavum, Zeynep Tansu
dc.contributor.authorTulek, Ahmet
dc.date.accessioned2025-10-29T11:23:53Z
dc.date.issued2022
dc.departmentFakülteler, Mühendislik Fakültesi, Biyomühendislik Bölümü
dc.description.abstractL-asparaginases, which are oncolytic enzymes, have been used in clinical applications for many years. These enzymes are also important in food processing industry due to their potential in acrylamide-mitigation. In this study, the gene for L-asparaginase (GkASN) from a thermophilic bacterium, Geobacillus kaustophilus, was cloned and expressed in E. coli Rosetta (TM) 2 (DE3) cells utilizing the pET-22b(+) vector. The 6xHis-tag attached enzyme was purified and analyzed both biochemically and structurally. The molecular mass of GkASN was determined as similar to 36 kDa by SDS-PAGE, Western Blotting, and MALDI-TOF MS analyses. Optimum temperature and pH for the enzyme was determined as 55 degrees C and 8.5, respectively. The enzyme retained 89% of its thermal stability at 37 degrees C and 75% at 55 degrees C after 6 h of incubation. The enzyme activity was inhibited in the presence of Cu2+, Fe3+, Zn2+, and EDTA, while the activity was enhanced in the presence of Mn2+, Mg2+, and thiol group protective agents such as 2-mercaptoethanol and DTT. The structural modeling analysis demonstrated that the catalytic residues of the enzyme were partially similar to other asparaginases. The therapeutic potential of GkASN was tested on hepatocellular carcinoma cells, a solid cancer type with high mortality rate and rapidly increasing incidence in recent years. We showed that the GkASN-induced asparagine deficiency effectively reduced the metastatic synergy in HCC SNU387 cells on a xCELLigence system with differentiated epithelial Hep3B and poorly differentiated metastatic mesenchymal HCC SNU387 cells.
dc.description.sponsorshipGebze Technical University research project, Turkey [BAP 2016-A-09]
dc.description.sponsorshipFunding information This study was supported by the Gebze Technical University research project, Turkey (BAP 2016-A-09) .
dc.identifier.doi10.1016/j.pep.2022.106146
dc.identifier.issn1046-5928
dc.identifier.issn1096-0279
dc.identifier.orcid0000-0003-1079-7837
dc.identifier.orcid0000-0003-0818-103X
dc.identifier.pmid35863721
dc.identifier.scopus2-s2.0-85134813117
dc.identifier.scopusqualityQ3
dc.identifier.urihttps://doi.org/10.1016/j.pep.2022.106146
dc.identifier.urihttps://hdl.handle.net/20.500.14854/9657
dc.identifier.volume199
dc.identifier.wosWOS:000843048200002
dc.identifier.wosqualityQ4
dc.indekslendigikaynakWeb of Science
dc.indekslendigikaynakScopus
dc.indekslendigikaynakPubMed
dc.language.isoen
dc.publisherAcademic Press Inc Elsevier Science
dc.relation.ispartofProtein Expression and Purification
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.snmzKA_WOS_20251020
dc.subjectL-asparaginase
dc.subjectGeobacillus kaustophilus DSM 7263(T)
dc.subjectAnti-tumor activity
dc.subjectxCELLigence
dc.titleBiochemical characterization and detection of antitumor activity of L-asparaginase from thermophilic Geobacillus kaustophilus DSM 7263T
dc.typeArticle

Dosyalar