An efficient gene deletion system for Bacillus thuringiensis

dc.contributor.authorDoruk, Tugrul
dc.contributor.authorGedik, Sedef Tunca
dc.date.accessioned2025-10-29T11:09:33Z
dc.date.issued2013
dc.departmentGebze Teknik Üniversitesi
dc.description.abstractIt is not easy to manipulate biosynthetic genes of Bacillus thuringiensis since there is a powerful methyl-specific restriction system in this microorganism. In this study, a PCR-based system was used to delete polyphosphate kinase gene (ppk) of Bacillus thuringiensis israelensis (Bti) by replacing the wild-type gene with a cassette containing the apramycin resistance gene as selectable marker. lambda-Red was used to promote recombination in Escherichia coli between a PCR-amplified apramycin resistance cassette (linear deletion cassette selectable in E. coli and Bti) and Bti DNA on a plasmid. The isolated mutant plasmid was transferred to Bti by conjugation. Double cross-over transformants were screened for their antibiotic resistance and the mutation was proven by PCR, southern blot hybridization and RT-PCR. The described method, which uses the advantage of quick plasmid construction in E. coli and simple transformation of linear deletion cassette, is very useful to delete entire gene/genes of Bti without any polar effects on genes transcriptionally downstream.
dc.description.sponsorshipScientific and Technological Research Council of Turkey [TBAG (107T812)]
dc.description.sponsorshipThis work was supported by The Scientific and Technological Research Council of Turkey grant [TBAG (107T812)].
dc.identifier.doi10.2478/s11756-013-0184-4
dc.identifier.endpage364
dc.identifier.issn0006-3088
dc.identifier.issue3
dc.identifier.orcid0000-0002-0057-320X
dc.identifier.orcid0000-0001-6896-4904
dc.identifier.scopus2-s2.0-84876076022
dc.identifier.scopusqualityQ2
dc.identifier.startpage358
dc.identifier.urihttps://doi.org/10.2478/s11756-013-0184-4
dc.identifier.urihttps://hdl.handle.net/20.500.14854/5855
dc.identifier.volume68
dc.identifier.wosWOS:000317645900002
dc.identifier.wosqualityQ4
dc.indekslendigikaynakWeb of Science
dc.indekslendigikaynakScopus
dc.language.isoen
dc.publisherVersita
dc.relation.ispartofBiologia
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı
dc.rightsinfo:eu-repo/semantics/openAccess
dc.snmzKA_WOS_20251020
dc.subjectBacillus thuringiensis
dc.subjectPCR
dc.subjecthomologous recombination
dc.subjectgenome manipulation
dc.subjectdeletion mutant
dc.titleAn efficient gene deletion system for Bacillus thuringiensis
dc.typeArticle

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