Chaetomium thermophilum formate dehydrogenase has high activity in the reduction of hydrogen carbonate (HCO3?) to formate
| dc.contributor.author | Aslan, Aşkın Sevinç | |
| dc.contributor.author | Valjakka, Jarkko | |
| dc.contributor.author | Ruupunen, Jouni | |
| dc.contributor.author | Yildirim, Deniz | |
| dc.contributor.author | Turner, Nicholas J. | |
| dc.contributor.author | Turunen, Ossi | |
| dc.contributor.author | Binay, Baris Iş | |
| dc.date.accessioned | 2025-10-29T12:10:20Z | |
| dc.date.issued | 2017 | |
| dc.department | Gebze Teknik Üniversitesi | |
| dc.description.abstract | While formate dehydrogenases (FDHs) have been used for cofactor recycling in chemoenzymatic synthesis, the ability of FDH to reduce CO<inf>2</inf> could also be utilized in the conversion of CO<inf>2</inf> to useful products via formate (HCOO?). In this study, we investigated the reduction of CO<inf>2</inf> in the form of hydrogen carbonate (HCO?<inf>3</inf> ) to formate by FDHs from Candida methylica (CmFDH) and Chaetomium thermophilum (CtFDH) in a NADH-dependent reaction. The catalytic performance with HCO?<inf>3</inf> as a substrate was evaluated by measuring the kinetic rates and conducting productivity assays. CtFDH showed a higher efficiency in converting HCO<inf>3</inf>? to formate than CmFDH, whereas CmFDH was better in the oxidation of formate. The pH optimum of the reduction was at pH 7-8. However, the high concentrations of HCO?<inf>3</inf> reduced the reaction rate. CtFDH was modeled in the presence of HCO?<inf>3</inf> showing that it fits to the active site. The active site setting for hydride transfer in CO<inf>2</inf> reduction was modeled. The hydride donated by NADH would form a favorable contact to the carbon atom of HCO?<inf>3</inf>, resulting in a surplus of electrons within the molecule. This would cause the complex formed by hydrogen carbonate and the hydride to break into formate and hydroxide ions. © 2020 Elsevier B.V., All rights reserved. | |
| dc.identifier.endpage | 55 | |
| dc.identifier.issn | 1741-0134 | |
| dc.identifier.issn | 1741-0126 | |
| dc.identifier.issue | 1 | |
| dc.identifier.pmid | 27887026 | |
| dc.identifier.scopus | 2-s2.0-85021858547 | |
| dc.identifier.scopusquality | Q3 | |
| dc.identifier.startpage | 47 | |
| dc.identifier.uri | https://hdl.handle.net/20.500.14854/15102 | |
| dc.identifier.volume | 30 | |
| dc.indekslendigikaynak | Scopus | |
| dc.indekslendigikaynak | PubMed | |
| dc.language.iso | en | |
| dc.publisher | Oxford University Press | |
| dc.relation.ispartof | Protein Engineering, Design and Selection | |
| dc.relation.publicationcategory | Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı | |
| dc.rights | info:eu-repo/semantics/closedAccess | |
| dc.snmz | KA_Scopus_20251020 | |
| dc.subject | Biotransformation of CO2 | |
| dc.subject | Catalytic mechanism | |
| dc.subject | Kinetic parameters with hydrogen carbonate | |
| dc.subject | Molecular modeling | |
| dc.subject | NAD+-dependent formate dehydrogenase | |
| dc.title | Chaetomium thermophilum formate dehydrogenase has high activity in the reduction of hydrogen carbonate (HCO3?) to formate | |
| dc.type | Article |








