Chaetomium thermophilum formate dehydrogenase has high activity in the reduction of hydrogen carbonate (HCO3?) to formate

dc.contributor.authorAslan, Aşkın Sevinç
dc.contributor.authorValjakka, Jarkko
dc.contributor.authorRuupunen, Jouni
dc.contributor.authorYildirim, Deniz
dc.contributor.authorTurner, Nicholas J.
dc.contributor.authorTurunen, Ossi
dc.contributor.authorBinay, Baris Iş
dc.date.accessioned2025-10-29T12:10:20Z
dc.date.issued2017
dc.departmentGebze Teknik Üniversitesi
dc.description.abstractWhile formate dehydrogenases (FDHs) have been used for cofactor recycling in chemoenzymatic synthesis, the ability of FDH to reduce CO<inf>2</inf> could also be utilized in the conversion of CO<inf>2</inf> to useful products via formate (HCOO?). In this study, we investigated the reduction of CO<inf>2</inf> in the form of hydrogen carbonate (HCO?<inf>3</inf> ) to formate by FDHs from Candida methylica (CmFDH) and Chaetomium thermophilum (CtFDH) in a NADH-dependent reaction. The catalytic performance with HCO?<inf>3</inf> as a substrate was evaluated by measuring the kinetic rates and conducting productivity assays. CtFDH showed a higher efficiency in converting HCO<inf>3</inf>? to formate than CmFDH, whereas CmFDH was better in the oxidation of formate. The pH optimum of the reduction was at pH 7-8. However, the high concentrations of HCO?<inf>3</inf> reduced the reaction rate. CtFDH was modeled in the presence of HCO?<inf>3</inf> showing that it fits to the active site. The active site setting for hydride transfer in CO<inf>2</inf> reduction was modeled. The hydride donated by NADH would form a favorable contact to the carbon atom of HCO?<inf>3</inf>, resulting in a surplus of electrons within the molecule. This would cause the complex formed by hydrogen carbonate and the hydride to break into formate and hydroxide ions. © 2020 Elsevier B.V., All rights reserved.
dc.identifier.endpage55
dc.identifier.issn1741-0134
dc.identifier.issn1741-0126
dc.identifier.issue1
dc.identifier.pmid27887026
dc.identifier.scopus2-s2.0-85021858547
dc.identifier.scopusqualityQ3
dc.identifier.startpage47
dc.identifier.urihttps://hdl.handle.net/20.500.14854/15102
dc.identifier.volume30
dc.indekslendigikaynakScopus
dc.indekslendigikaynakPubMed
dc.language.isoen
dc.publisherOxford University Press
dc.relation.ispartofProtein Engineering, Design and Selection
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.snmzKA_Scopus_20251020
dc.subjectBiotransformation of CO2
dc.subjectCatalytic mechanism
dc.subjectKinetic parameters with hydrogen carbonate
dc.subjectMolecular modeling
dc.subjectNAD+-dependent formate dehydrogenase
dc.titleChaetomium thermophilum formate dehydrogenase has high activity in the reduction of hydrogen carbonate (HCO3?) to formate
dc.typeArticle

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