A phosphotransacetylase from uropathogenic Staphylococcus saprophyticus: Characterization, kinetic analysis and its allosteric inhibition by ?-ketoglutarate

dc.contributor.authorYildiz, Hamdi
dc.contributor.authorAksoy, Ilknur Yurtsever
dc.contributor.authorTurkan, Ali
dc.date.accessioned2025-10-29T11:07:52Z
dc.date.issued2012
dc.departmentFakülteler, Temel Bilimler Fakültesi, Kimya Bölümü
dc.description.abstractObjectives: The genome of Staphylococcus saprophyticus, an uropathogen, contains SSP2124 gene encoding a putative phosphotransacetylase (Pta). Pta plays significant role in energy metabolism as well as colonization of uropathogens. In this study, cloning, expression, characterization and kinetic analysis of S. saprophyticus Pta have been undertaken. Methods: The SSP2124 gene was amplified by PCR from the genome of S. saprophyticus and subcloned into pET28a(+) vector and expressed in E. coli BL21. The recombinant Pta was affinity purified by Ni-NTA column. Its characterization as well as its steady-state kinetic analysis has been studied by standard procedures. Results: The recombinant Pta forms dimers as determined by gel filtration. The activity of the enzyme was maximal at a temperature range of 30-35 degrees C and at the pH range of 7.5-8.5. It was greatly stimulated by K+ and NH4+ ions, but inhibited by Na+ ion. Kinetic analysis and product inhibition studies suggest that there is a kinetic mechanism that proceeds through random addition of both substrates to the enzyme before any product is released. The enzyme was inhibited in both acetyl-CoA-forming (forward) and acetyl phosphate-forming (reverse) directions by adenosine triphosphate (ATP) and alpha-ketoglutarate but not affected by pyruvate and reduced nicotinamide adenine dinucleotide. ATP was competitive with respect to CoA and noncompetitive with respect to acetyl phosphate. The inhibition by alpha-ketoglutarate, on the other hand, was allosteric with half-saturations at 6.5 +/- 0.7 mM and Hill coefficients of 2.6 +/- 0.8 and 3.3 +/- 0.2, in forward and reverse directions, respectively. Conclusions: S. saprophyticus Pta belongs to the Pta I family and show similar biochemical features as well as kinetic mechanism with other members. And the most importantly, this study presents the first example of allosteric regulation of a member of class I Ptas.
dc.identifier.doi10.5505/tjb.2012.52824
dc.identifier.endpage263
dc.identifier.issn0250-4685
dc.identifier.issue3
dc.identifier.orcid0000-0001-7944-5077
dc.identifier.scopus2-s2.0-84867144444
dc.identifier.scopusqualityQ3
dc.identifier.startpage251
dc.identifier.urihttps://doi.org/10.5505/tjb.2012.52824
dc.identifier.urihttps://hdl.handle.net/20.500.14854/5107
dc.identifier.volume37
dc.identifier.wosWOS:000314288600005
dc.identifier.wosqualityQ4
dc.indekslendigikaynakWeb of Science
dc.indekslendigikaynakScopus
dc.language.isoen
dc.publisherTurkish Biochem Soc
dc.relation.ispartofTurkish Journal of Biochemistry-Turk Biyokimya Dergisi
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.snmzKA_WOS_20251020
dc.subjectPhosphotransacetylase
dc.subjectStaphylococcus saprophyticus
dc.subjectthe eutD gene
dc.subjectkinetic analysis
dc.subjectalpha-ketoglutarate
dc.subjectallosteric inhibition
dc.titleA phosphotransacetylase from uropathogenic Staphylococcus saprophyticus: Characterization, kinetic analysis and its allosteric inhibition by ?-ketoglutarate
dc.typeArticle

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