Improved activity and thermostability of Bacillus pumilus lipase by directed evolution

dc.contributor.authorAkbulut, Nagihan
dc.contributor.authorOzturk, Merve Tuzlakoglu
dc.contributor.authorPijning, Tjaard
dc.contributor.authorOzturk, Saliha Issever
dc.contributor.authorGumusel, Fusun
dc.date.accessioned2025-10-29T11:27:05Z
dc.date.issued2013
dc.departmentGebze Teknik Üniversitesi
dc.description.abstractTo improve enzymatic activity of Bacillus pumilus lipases, DNA shuffling was applied to two lipase genes from local B. pumilus isolates. Using a high-throughput activity assay, the mutant with highest activity was selected. This chimeric mutant (L3-3), carrying two crossover positions and three point mutations, has a specific activity 6.4 and 8.2 times higher than the two parent enzymes. The mutant also is more tolerant to various detergents and organic solvents, and has a 9 times longer half-life at 50 degrees C. Homology modeling of mutant L3-3, based on the highly homologous B. subtilis lipase A, shows that the increased thermostability is likely due to structural rigidification and reduced surface hydrophobicity. Increased specific activity may result from the location of mutations close to the active site. Together, our results show that it is possible to evolve, by DNA shuffling, B. pumilus lipase variants with improved applicability as biocatalysts, even if the two parent enzymes are highly similar. (C) 2013 Elsevier B.V. All rights reserved.
dc.description.sponsorshipResearch Fund of Gebze Institute of Technology [BAP 2008A11]
dc.description.sponsorshipThe authors would like to thank MSc. Lalehan Akbulut Salar for excellent technical assistance, Dr. Alp Kibaroglu for his contribution to DNA sequencing analysis, and Prof. Dr. Tamer Yagci, Assoc. Prof. Dr. Ayhan Celik and Dr. Yusuf Ozturk for providing materials. Prof. Dr. Bauke W. Dijkstra is greatly acknowledged for essential discussions and valuable comments on the manuscript. This work was partly supported by the Research Fund of Gebze Institute of Technology (BAP 2008A11).
dc.identifier.doi10.1016/j.jbiotec.2012.12.016
dc.identifier.endpage129
dc.identifier.issn0168-1656
dc.identifier.issn1873-4863
dc.identifier.issue1
dc.identifier.orcid0000-0003-4107-3663
dc.identifier.pmid23313890
dc.identifier.scopus2-s2.0-84875117804
dc.identifier.scopusqualityQ1
dc.identifier.startpage123
dc.identifier.urihttps://doi.org/10.1016/j.jbiotec.2012.12.016
dc.identifier.urihttps://hdl.handle.net/20.500.14854/10545
dc.identifier.volume164
dc.identifier.wosWOS:000315527900018
dc.identifier.wosqualityQ2
dc.indekslendigikaynakWeb of Science
dc.indekslendigikaynakScopus
dc.indekslendigikaynakPubMed
dc.language.isoen
dc.publisherElsevier Science Bv
dc.relation.ispartofJournal of Biotechnology
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.snmzKA_WOS_20251020
dc.subjectBacillus pumilus lipase
dc.subjectBiocatalyst
dc.subjectDirected evolution
dc.subjectDNA shuffling
dc.subjectThermostability
dc.subject3D homology model
dc.titleImproved activity and thermostability of Bacillus pumilus lipase by directed evolution
dc.typeArticle

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