Improved activity and thermostability of Bacillus pumilus lipase by directed evolution
| dc.contributor.author | Akbulut, Nagihan | |
| dc.contributor.author | Ozturk, Merve Tuzlakoglu | |
| dc.contributor.author | Pijning, Tjaard | |
| dc.contributor.author | Ozturk, Saliha Issever | |
| dc.contributor.author | Gumusel, Fusun | |
| dc.date.accessioned | 2025-10-29T11:27:05Z | |
| dc.date.issued | 2013 | |
| dc.department | Gebze Teknik Üniversitesi | |
| dc.description.abstract | To improve enzymatic activity of Bacillus pumilus lipases, DNA shuffling was applied to two lipase genes from local B. pumilus isolates. Using a high-throughput activity assay, the mutant with highest activity was selected. This chimeric mutant (L3-3), carrying two crossover positions and three point mutations, has a specific activity 6.4 and 8.2 times higher than the two parent enzymes. The mutant also is more tolerant to various detergents and organic solvents, and has a 9 times longer half-life at 50 degrees C. Homology modeling of mutant L3-3, based on the highly homologous B. subtilis lipase A, shows that the increased thermostability is likely due to structural rigidification and reduced surface hydrophobicity. Increased specific activity may result from the location of mutations close to the active site. Together, our results show that it is possible to evolve, by DNA shuffling, B. pumilus lipase variants with improved applicability as biocatalysts, even if the two parent enzymes are highly similar. (C) 2013 Elsevier B.V. All rights reserved. | |
| dc.description.sponsorship | Research Fund of Gebze Institute of Technology [BAP 2008A11] | |
| dc.description.sponsorship | The authors would like to thank MSc. Lalehan Akbulut Salar for excellent technical assistance, Dr. Alp Kibaroglu for his contribution to DNA sequencing analysis, and Prof. Dr. Tamer Yagci, Assoc. Prof. Dr. Ayhan Celik and Dr. Yusuf Ozturk for providing materials. Prof. Dr. Bauke W. Dijkstra is greatly acknowledged for essential discussions and valuable comments on the manuscript. This work was partly supported by the Research Fund of Gebze Institute of Technology (BAP 2008A11). | |
| dc.identifier.doi | 10.1016/j.jbiotec.2012.12.016 | |
| dc.identifier.endpage | 129 | |
| dc.identifier.issn | 0168-1656 | |
| dc.identifier.issn | 1873-4863 | |
| dc.identifier.issue | 1 | |
| dc.identifier.orcid | 0000-0003-4107-3663 | |
| dc.identifier.pmid | 23313890 | |
| dc.identifier.scopus | 2-s2.0-84875117804 | |
| dc.identifier.scopusquality | Q1 | |
| dc.identifier.startpage | 123 | |
| dc.identifier.uri | https://doi.org/10.1016/j.jbiotec.2012.12.016 | |
| dc.identifier.uri | https://hdl.handle.net/20.500.14854/10545 | |
| dc.identifier.volume | 164 | |
| dc.identifier.wos | WOS:000315527900018 | |
| dc.identifier.wosquality | Q2 | |
| dc.indekslendigikaynak | Web of Science | |
| dc.indekslendigikaynak | Scopus | |
| dc.indekslendigikaynak | PubMed | |
| dc.language.iso | en | |
| dc.publisher | Elsevier Science Bv | |
| dc.relation.ispartof | Journal of Biotechnology | |
| dc.relation.publicationcategory | Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı | |
| dc.rights | info:eu-repo/semantics/closedAccess | |
| dc.snmz | KA_WOS_20251020 | |
| dc.subject | Bacillus pumilus lipase | |
| dc.subject | Biocatalyst | |
| dc.subject | Directed evolution | |
| dc.subject | DNA shuffling | |
| dc.subject | Thermostability | |
| dc.subject | 3D homology model | |
| dc.title | Improved activity and thermostability of Bacillus pumilus lipase by directed evolution | |
| dc.type | Article |








